Laboratoire d'Informatique Médicale et d'Ingénierie des Connaissances en e-Santé

UMRS_1142

Logo Tremplin Carnot
FR EN
Logo INSERM
Logo UPMC Logo université Paris 13

Publications

Image décorative
Publications de LAMY Jean-Baptiste
Publications de type "Article indexé"
2017
1. Lamy JB "Owlready: Ontology-oriented programming in Python with automatic classification and high level constructs for biomedical ontologies" Artificial Intelligence Medicine 2017
2. Lamy JB, Berthelot H, Capron C, Favre M "Rainbow boxes: a new technique for overlapping set visualization and two applications in the biomedical domain" Journal of Visual Language and Computing 2017
3. Tsopra R, Kinouani S, Venot A, Jaulent MC, Duclos C, Lamy JB "Design of a Visual Interface for Comparing Antibiotics Using Rainbow Boxes." Studies in health technology and informatics 2017 235:529-533
4. Lamy JB, Berthelot H, Favre M, Ugon A, Duclos C, Venot A "Using visual analytics for presenting comparative information on new drugs" Journal of Biomedical Informatics 2017
2016
5. Lamy JB, Soualmia LF, Duclos C, Venot A "Formalisation de la sémantique des langages iconiques : méthode à base d'ontologie et applications" Revue d’intelligence artificielle (RIA) 2016 accepté
6. Lamy JB, Ugon A, Berthelot H "Automatic Extraction of Drug Adverse Effects from Product Characteristics (SPCs): A Text Versus Table Comparison." Studies in health technology and informatics 2016 228:339-43
7. Lamy JB "Ontology-Oriented Programming for Biomedical Informatics." Studies in health technology and informatics 2016 221:64-8
2015
8. Lamy JB, Séroussi B, Griffon N, Kerdelhué G, Jaulent MC, Bouaud J "Toward a formalization of the process to select IMIA Yearbook best papers." Methods of information in medicine 2015 54:135-44
9. Ugon A, Berthelot H, Venot A, Favre M, Duclos C, Lamy JB "Abstractive Summarization of Drug Dosage Regimens for Supporting Drug Comparison." Studies in health technology and informatics 2015 213:79-82
10. Lamy JB, Venot A, Duclos C "PyMedTermino: an open-source generic API for advanced terminology services." Studies in health technology and informatics 2015 210:924-8
2014
11. Griffon N, Kerdelhué G, Hamek S, Hassler S, Boog C, Lamy JB, Duclos C, Venot A, Darmoni SJ "Design and usability study of an iconic user interface to ease information retrieval of medical guidelines." Journal of the American Medical Informatics Association : JAMIA 2014 21:e270-7
12. Vaillant Pascal, Lamy Jean-Baptiste "Using graph transformation algorithms to generate natural language equivalents of icons expressing medical concepts" Lecture Notes in Artificial Intelligence 2014 LNAI 8655, ISBN-13 9:353–362 TSD 2014 Brno République Tchèque
13. Pereira S, Hassler S, Hamek S, Boog C, Leroy N, Beuscart-Zéphir MC, Favre M, Venot A, Duclos C, Lamy JB et al. "Improving access to clinical practice guidelines with an interactive graphical interface using an iconic language." BMC medical informatics and decision making 2014 14:77
14. Bouaud J, Lamy JB "A 2014 medical informatics perspective on clinical decision support systems: do we hit the ceiling of effectiveness?" Yearbook of medical informatics 2014 9:163-6
15. Griffon N, Kerdelhué G, Soualmia LF, Merabti T, Grosjean J, Lamy JB, Venot A, Duclos C, Darmoni SJ "Evaluating alignment quality between iconic language and reference terminologies using similarity metrics." BMC medical informatics and decision making 2014 14:17
16. Simon C, Hassler S, Beuscart-Zephir MC, Favre M, Venot A, Duclos C, Lamy JB "Using an iconic language to improve access to electronic medical records in general medicine." Studies in health technology and informatics 2014 205:333-7
17. Sedki K, Duclos C, Lamy JB "A Preference-based framework for medical decision making." Studies in health technology and informatics 2014 205:63-7
2013
18. Lamy JB, Soualmia LF, Kerdelhué G, Venot A, Duclos C "Validating the semantics of a medical iconic language using ontological reasoning." Journal of biomedical informatics 2013 46:56-67
19. Bouaud J, Lamy JB, Section Editors for the IMIA Yearbook Section on Decision Support "A medical informatics perspective on clinical decision support systems. Findings from the yearbook 2013 section on decision support." Yearbook of medical informatics 2013 8:128-31
20. Yasini M, Duclos C, Venot A, Lepage E, Lamy JB "A guideline-derived model to facilitate the implementation of test-ordering rules within a hospital information system." Studies in health technology and informatics 2013 192:719-23
21. Lamy JB, Tsopra R, Venot A, Duclos C "A semi-automatic semantic method for mapping SNOMED CT concepts to VCM Icons." Studies in health technology and informatics 2013 192:42-6
22. Yasini M, Ebrahiminia V, Duclos C, Venot A, Lamy JB "Comparing the use of SNOMED CT and ICD10 for coding clinical conditions to implement laboratory guidelines." Studies in health technology and informatics 2013 186:200-4
2012
23. Tsopra R, Lamy JB, Venot A, Duclos C "Design of an original interface that facilitates the use of clinical practice guidelines of infection by physicians in primary care." Studies in health technology and informatics 2012 180:93-7
24. Lamy JB, Beuscart-Zéphir MC, Boog C, Darmoni S, Favre M, Guigue L, Hamek S, Hassler S, Kerdelhué G, Leroy N et al. "Langage iconique et interfaces interactives en médecine : application aux dossiers patients, guides de bonnes pratiques et moteurs de recherche médicaux" IRBM 2012 33:129-136
2011
25. Lamy JB, Ebrahiminia V, Seroussi B, Bouaud J, Simon C, Favre M, Falcoff H, Venot A "A generic system for critiquing physicians' prescriptions: usability, satisfaction and lessons learnt." Studies in health technology and informatics 2011 169:125-9
26. Yasini M, Duclos C, Lamy JB, Venot A "Facilitating access to laboratory guidelines by modeling their contents and designing a computerized user interface." Studies in health technology and informatics 2011 169:487-91
27. Bencherif S, Khau S, Bloede F, Lamy JB, Falcoff H "Adaptation du traitement chez les patients hypertendus" Exercer 2011 22:88
2010
28. Lamy JB, Ebrahiminia V, Riou C, Seroussi B, Bouaud J, Simon C, Dubois S, Butti A, Simon G, Favre M et al. "How to translate therapeutic recommendations in clinical practice guidelines into rules for critiquing physician prescriptions? Methods and application to five guidelines." BMC medical informatics and decision making 2010 10:31
29. Lamy JB, Duclos C, Hamek S, Beuscart-Zéphir MC, Kerdelhué G, Darmoni S, Favre M, Falcoff H, Simon C, Pereira S et al. "Towards iconic language for patient records, drug monographs, guidelines and medical search engines." Studies in health technology and informatics 2010 160:156-60
2009
30. Toussi M, Lamy JB, Le Toumelin P, Venot A "Using data mining techniques to explore physicians' therapeutic decisions when clinical guidelines do not provide recommendations: methods and example for type 2 diabetes." BMC medical informatics and decision making 2009 9:28
31. Falcoff H, Benainous O, Gillaizeau F, Favre M, Simon C, Desfontaines E, Lamy JB, Venot A, Seroussi B, Bouaud J et al. "Développement et étude d’impact d’un système informatique de tableaux de bord pour le suivi des pathologies chroniques en médecine générale" Pratiques et organisation des soins 2009 40:177-189
2008
32. Lamy JB, Venot A, Bar-Hen A, Ouvrard P, Duclos C "Design of a graphical and interactive interface for facilitating access to drug contraindications, cautions for use, interactions and adverse effects." BMC medical informatics and decision making 2008 8:21
33. Lamy JB, Duclos C, Bar-Hen A, Ouvrard P, Venot A "An iconic language for the graphical representation of medical concepts." BMC medical informatics and decision making 2008 8:16
34. Lamy JB, Ellini A, Ebrahiminia V, Zucker JD, Falcoff H, Venot A "Use of the C4.5 machine learning algorithm to test a clinical guideline-based decision support system." Studies in Health Technology and Informatics 2008 136:223-8
35. Lamy JB, Duclos C, Rialle V, Venot A "Vers une méthodologie rigoureuse de conception des langages graphiques s'appuyant sur les sciences cognitives." Revue d'Intelligence Artificielle 2008 22:265-280
36. Lamy JB, Duclos C, Rialle V, Venot A "Quelle méthodologie tenant compte des sciences cognitives pour la conception des langages graphiques ?" Revue d’intelligence artificielle (RIA) 2008 22:265-280
2005
37. Lamy JB, Duclos C, Rialle V, Venot A "Which Graphical Approaches should be Used to Represent Medical Knowledge?" Studies in health technology and informatics 2005 116:719-24
2003
38. Rialle V, Lamy JB, Noury N, Bajolle L "Telemonitoring of patients at home - a software agent approach." Computer Methods and Programs in Biomedicine 2003 72:257-268
39. Rialle V, Noury N, Bajolle L, Lamy JB, Virone G, Duchêne F, Moha N, Demongeot J "Le concept d’Habitat Intelligent pour la Santé: considérations techniques et scientifiques pour un service médico-social" Revue de Gériatrie 2003 28:403-416
Publications de type "Communication dans un congrès"
2017
40. Lamy JB, Tsopra R "Translating visually the reasoning of a perceptron: the weighted rainbow boxes technique and an application in antibiotherapy" 2017 International Conference Information Visualisation (iV) Londres
41. Lamy JB, Ugon A, Duclos C, Venot A, Favre M, Berthelot H "Une plate-forme visuelle pour une information comparative sur les nouveaux médicaments" 2017 Ingénierie des Connaissances (IC) Caen France
2016
42. Lamy JB, Berthelot H, Favre M "Rainbow boxes: a technique for visualizing overlapping sets and an application to the comparison of drugs properties" 2016 International Conference Information Visualisation 2016 Lisbonne Portugal
43. Lamy JB, Berthelot H, Favre M "Les boîtes arc-en-ciel : une nouvelle technique pour visualiser les relations d'instanciation dans les ontologies et son application à la comparaison des propriétés des médicaments" 2016 Conférence Nationale en Intelligence Artificielle (CNIA) Clermont-Ferrand France
2015
44. Lamy JB, Ugon A, Favre M, Duclos C, Venot A, Berthelot H "Comparaison et visualisation des contre-indications des médicaments" 2015 3ème Symposium Ingénierie de l’Information Médicale (SIIM 2015) Rennes France
45. Lamy JB, Berthelot H "Ontopy : programmation orientée ontologie en Python" 2015 IC2015 Rennes France
46. Lamy JB, Venot A, Duclos C "PyMedTermino - an open-source generic API for advanced terminology services." MIE 2015 924-928
2014
47. Lamy JB, Soualmia L, Venot A, Duclos C "Validation de la sémantique d'un langage iconique médical à l'aide d'une ontologie : méthodes et applications" 2014 51-62 IC - 25èmes Journées francophones d'Ingénierie des Connaissances Clermont-Ferrand France
48. Simon C, Hassler S, Beuscart-Zéphir MC, Favre M, Venot A, Duclos C, Lamy JB "Using an Iconic Language to Improve Access to Electronic Medical Records in General Medicine." MIE 2014 333-337
49. Lamy JB, Berthelot H, Favre M, Venot A, Duclos C "Toward an Ontology-Based system for the Automatic Detection of Biases and Weaknesses in Drug Clinical Trial Results." MIE 2014 1197
50. Sedki K, Duclos C, Lamy JB "A Preference-based framework for medical decision making." MIE 2014 63-67
2013
51. Lamy JB, Tsopra R, Venot A, Duclos C "A Semi-automatic Semantic Method for Mapping SNOMED CT Concepts to VCM Icons." MedInfo 2013 42-46
2012
52. Lamy JB, Beuscart-Zéphir MC, Boog C, Darmoni S, Favre M, Guigue L, Pinaud N, Hamek S, Hassler S, Kerdelhué G et al. "Langage Iconique et Interfaces Interactives pour la Médecine" Colloque ANR TecSan 2012
53. Tsopra R, Lamy JB, Venot A, Duclos C "Design of an original interface that facilitates the use of clinical practice guidelines of infection by physicians in primary care." MIE 2012 93-97
2011
54. Yasini M, Duclos C, Lamy JB, Venot A "Facilitating Access to Laboratory Guidelines by Modeling their Contents and Designing a Computerized User Interface." MIE 2011 487-491
Publication de type "Poster"
2010
55. Kerdelhué G, Lamy JB, Venot A, Duclos C, Darmoni S "An iconic language for the ’CISMeF Bonnes pratiques’ website" Poster EAHIL conference 2010
Publications de type "Chapitre d'ouvrage"
2017
56. Lamy JB, Ugon A, Berthelot H, Favre M "A visual decision support system for helping physicians to make a decision on new drugs" Lecture Notes in Business Information Processing 2017 Decision Support Sys:3-15
2014
57. Duclos C, Burgun A, Lamy JB, Landais P, Rodrigues JM, Soualmia L, Zweigenbaum P "Medical Vocabulary, Terminological Resources and Information Coding in the Health Domain" Medical Informatics, e-Health - Fundamentals and Applications 2014 11-42
2012
58. Duclos C, Burgun A, Lamy JB, Landais P, Rodrigues JM, Soualmia L, Zweigenbaum P "Le vocabulaire médical, les ressources terminologiques, le codage de l'information en santé" Informatique Médicale, e-Santé - Fondements et applications 2012
2010
59. Lamy JB, Ellini A, Nobécourt J, Venot A, Zucker JD "Testing methods for decision support systems" Decision support systems 2010 87-98
Publications de type "Brevet"
2007
60. Lamy JB, Duclos C, Venot A "Graphical representation of medical knowledge (EP 2018620 A1)" 2007
2006
61. Lamy JB, Duclos C, Venot A "Graphical representation of medical knowledge (US20090265188)" 2006
Publication de type "Rapport"
2016
62. Lamy JB, Berthelot H, Ugon A, Kraiem L, Badra F, Duclos C, Venot A "Rapport scientifique du projet VIIIP (Visualisation Intégrée de l'Information sur l'Innovation Thérapeutique)" 2016
Publications de type "Thèse et mémoire"
2006
63. Lamy JB "Conception et évaluation de méthodes de visualisation des connaissances médicales : Mise au point d’un langage graphique et application aux connaissances sur le médicament" 2006
2003
64. Lamy JB "Reconnaissance de scénarios, application à la télé-surveillance médicale à domicile" 2003
2002
65. Lamy JB "Télé-surveillance médicale: conception d’un système d’analyse temporelle, validation par simulation et reconstitution par réalité virtuelle" 2002
Publications de type "Actes congrès"
2017
66. Lamy JB "Les oiseaux picorant artificiels : une nouvelle méta-heuristique inspirée du comportement des pigeons" 2017 Caen
67. Lamy JB , Ugon A, Duclos C, Venot A, Berthelot H, Favre M, Lamas E, Lamy JB "Une plate-forme visuelle pour une information comparative sur les nouveaux médicaments" 2017 Ingénierie des Connaissances (IC) 2017 Caen
2016
68. Kouame A, Brou KM, Lo M, Lamy JB "Vers un système iconique d’aide à la décision pour les praticiens de la médecine traditionnelle" Colloque Africain sur la Recherche en Informatique et Mathématiques (CARI 2016) 2016
69. Kouamé A, Lamy JB, Brou KM, Lo M "Modelization of recipe in African traditional medicine with visual ontology approach, iconic sketch" Africomm conference 2016 accepté
2014
70. Vaillant P, Lamy JB "Using Graph Transformation Algorithms to Generate Natural Language Equivalents of Icons Expressing Medical Concepts." TSD 2014 353-362
2013
71. Ebrahiminia V, Yasini M, Lamy JB "Mapping ASTI patient's therapeutic-data model to virtual Medical Record - can VMR represent therapeutic data elements used by ASTI in clinical guideline implementations?" AMIA 2013
2012
72. Lamy JB, Venot A, Duclos C "VCM - an iconic and compositional representation of medical concepts." AMIA 2012
2009
73. Lamy JB, Duclos C, Venot A "De l'analyse d'un corpus de texte à la conception d'une interface graphique facilitant l'accès aux connaissances sur le médicament." Actes d'IC 2009 265-276
2008
74. Lamy JB, Duclos C, Venot A "Quelles applications pédagogiques pour un langage graphique médical ?" Congrès Internet et Pédagogie pour les Sciences de la Santé et du Sport (IP3S2008) 2008
2006
75. Lamy JB, Duclos C, Rialle V, Venot A "Vers une méthode rigoureuse de conception des langages graphiques s’appuyant sur les sciences cognitives" 4ème atelier visualisation et extraction de connaissances, 6èmes journées francophones d’Extraction et de Gestion des Connaissances 2006
2005
76. Lamy JB, Duclos C, Rialle V, Venot A "Classification et analyse critique des approches graphiques appliquées à la visualisation des connaissances médicales" Journées Francophones d’Informatique Médicale (JFIM2005) 2005 1-9
2004
77. Lamy JB, Duclos C, Rialle V, Venot A "Quelles approches graphiques pour faciliter la diffusion des connaissances médicales ?" 5ème congrès Internet et Pédagogie Médicale (IPM 2004) 2004 39-40
Traitement en cours ...