Laboratoire d'Informatique Médicale et d'Ingénierie des Connaissances en e-Santé

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Publications

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Publications de DARMONI Stefan
Publications de type "Article indexé dans PubMed ou WOS en informatique ou informatique médicale"
2020
1. Siefridt C, Grosjean J, Lefebvre T, Rollin L, Darmoni S, Schuers M "Evaluation of automatic annotation by a multi-terminological concepts extractor within a corpus of data from family medicine consultations." International journal of medical informatics 2020 133:104009
2019
2. Lelong R, Soualmia LF, Grosjean J, Taalba M, Darmoni SJ "Building a Semantic Health Data Warehouse in the Context of Clinical Trials: Development and Usability Study." JMIR medical informatics 2019 7:e13917
3. Dufour JC, Grosjean J, Darmoni S, Yasini M, Marchand G, Simon C, Sarradon-Eck A, Préau M, Darmon D, Schuers M et al. "ApiAppS: A Project to Study and Help Practitioners in Recommending mHealth Apps and Devices to Their Patients." Studies in health technology and informatics 2019 264:1919-1920
4. Benis A, Crisan-Vida M, Stoicu-Tivadar L, Darmoni S "A Multi-Lingual Dictionary for Health Informatics as an International Cooperation Pillar." Studies in health technology and informatics 2019 262:31-34
5. Gillibert A, Griffon N, Schuers M, Hardy K, Elmerini A, Letord C, Staccini P, Darmoni SJ, Benichou J, Contributors et al. "Impact on medical practice of accessing pharmaceutical records." International journal of medical informatics 2019 121:58-63
2018
6. Jamoulle M, Resnick M, Grosjean J, Ittoo A, Cardillo E, Vander Stichele R, Darmoni S, Vanmeerbeek M "Development, dissemination, and applications of a new terminological resource, the Q-Code taxonomy for professional aspects of general practice/family medicine." The European journal of general practice 2018 24:68-73
7. Tvardik N, Kergourlay I, Bittar A, Segond F, Darmoni S, Metzger MH "Accuracy of using natural language processing methods for identifying healthcare-associated infections." International journal of medical informatics 2018 117:96-102
8. Cabot C, Soualmia L, Grosjean J, Griffon N, Darmoni S "Evaluation of the Terminology Coverage in the French Corpus LiSSa." Studies in Health Technology and Informatics 2018 126-130
2017
9. Jamoulle M, Grosjean J, Resnick M, Ittoo A, Treuherz A, Vander Stichele R, Cardillo E, Darmoni SJ, Shamenek FS, Vanmeerbeek M et al. "A Terminology in General Practice/Family Medicine to Represent Non-Clinical Aspects for Various Usages: The Q-Codes." Studies in health technology and informatics 2017 235:471-475
2016
10. Schuers M, Griffon N, Kerdelhué G, Foubert Q, Mercier A, Darmoni S "Behavior and attitudes of residents and general practitioners in searching for health information: From intention to practice" International Journal of Medical Informatics 2016 89:9-14
11. CHEBIL Wiem, Soualmia L, NAZIH Mohamed Omri, Darmoni S "Indexing biomedical documents with a possibilistic network" JASIST 2016 67(4):928-941
2015
12. Aimé X, Traoré L, Chniti A, Sadou E, Ouagne D, Charlet J, Jaulent MC, Darmoni S, Griffon N, Amardeilh F et al. "Semantic interoperability platform for Healthcare Information Exchange" IRBM 2015 in press
13. Gicquel Q, Tvardik N, Bouvry C, Kergourlay I, Bittar A, Segond F, Darmoni S, Metzger MH "Annotation methods to develop and evaluate an expert system based on natural language processing in electronic medical records." Studies in health technology and informatics 2015 216:1067
14. Merabti T, Lelong R, Darmoni S "InfoRoute: the CISMeF Context-specific Search Algorithm." Studies in health technology and informatics 2015 216:544-8
15. Franco-Contreras J, Coatrieux G, Massari P, Darmoni S, Cuppens-Boulahia N, Cuppens F, Roux C "Data quality evaluation in medical database watermarking." Studies in health technology and informatics 2015 210:276-80
2014
16. Griffon N, Schuers M, Soualmia L, Grosjean J, Kerdelhué G, Kergourlay I, Dahamna B, Darmoni S "A Search Engine to Access PubMed Monolingual Subsets: Proof of Concept and Evaluation in French" Journal of Medical Internet Research 2014 16:e271
17. Grosjean J, Soualmia LF, Bouarech K, Jonquet C, Darmoni SJ "An approach to compare bio-ontologies portals." Studies in health technology and informatics 2014 205:1008-12
18. Chebil W, Soualmia LF, Omri MN, Darmoni SJ "Extraction possibiliste de concepts MeSH à partir de documents biomédicaux." Revue d'Intelligence Artificielle 2014 28:729-752
2013
19. Gerbier-Colomban S, Gicquel Q, Millet AL, Riou C, Grando J, Darmoni S, Potinet-Pagliaroli V, Metzger MH "Evaluation of syndromic algorithms for detecting patients with potentially transmissible infectious diseases based on computerised emergency-department data." BMC medical informatics and decision making 2013 13:101
20. Gehanno JF, Rollin L, Darmoni S "Is the coverage of Google Scholar enough to be used alone for systematic reviews." BMC medical informatics and decision making 2013 13:7
21. Griffon N, Charlet J, Darmoni S, Section Editors for the IMIA Yearbook 2013, Section on Knowledge Representation and Management "Knowledge representation and management: towards an integration of a semantic web in daily health practice." Yearbook of medical informatics 2013 8:155-8
22. Merabti T, Soualmia L, Grosjean J, Letord C, Darmoni S "Assisting the Translation of SNOMED CT into French." Studies in Health Technology and Informatics 2013 192:47-51
23. Darmoni S, Soualmia L, Griffon N, Grosjean J, Kerdelhué G, Kergourlay I, Dahamna B "Multi-lingual Search Engine to Access PubMed Monolingual Subsets: A Feasibility Study." Studies in Health Technology and Informatics 2013 192:966
24. Soualmia L, Letord C, Merabti T, Griffon N, Manel J, Darmoni S "Translating MeSH Concepts." Studies in Health Technology and Informatics 2013 192:1007
25. Jung M, Hoerbst A, Hackl WO, Kirrane F, Borbolla D, Jaspers MW, Oertle M, Koutkias V, Ferret L, Massari P et al. "Attitude of physicians towards automatic alerting in computerized physician order entry systems. A comparative international survey." Methods of information in medicine 2013 52:99-108
26. Soualmia LF, Sakji S, Letord C, Rollin L, Massari P, Darmoni SJ "Improving information retrieval with multiple health terminologies in a quality-controlled gateway." Health information science and systems 2013 1:8
2012
27. Gehanno JF, Rollin L, Ladner J, Darmoni SJ "How is occupational medicine represented in the major journals in general medicine?" Occupational and environmental medicine 2012 69:603-5
28. Lamy JB, Beuscart-Zéphir MC, Boog C, Darmoni S, Favre M, Guigue L, Hamek S, Hassler S, Kerdelhué G, Leroy N et al. "Langage iconique et interfaces interactives en médecine : application aux dossiers patients, guides de bonnes pratiques et moteurs de recherche médicaux" IRBM 2012 33:129-136
29. Soualmia L, Prieur-Gaston E, Moalla Z, Lecroq T, Darmoni S "Matching health information seekers' queries to medical terms." BMC Bioinformatics 2012 13 Suppl 14:S11
30. Thiessard F, Mougin F, Diallo G, Jouhet V, Cossin S, Garcelon N, Campillo B, Jouini W, Grosjean J, Massari P et al. "RAVEL: retrieval and visualization in ELectronic health records." Studies in health technology and informatics 2012 180:194-8
31. Proux D, Hagège C, Gicquel Q, Kergoulay I, Pereira S, Rondeau G, Darmoni S, Segond F, Metzger MH "ALADIN: A monitoring system for patient discharge summary to detect hospital acquired infection" IRBM 2012 33:137-142
2011
32. Gehanno JF, Ladner J, Rollin L, Dahamna B, Darmoni SJ "How are the different specialties represented in the major journals in general medicine?" BMC medical informatics and decision making 2011 11:3
33. Abdoune H, Merabti T, Darmoni SJ, Joubert M "Assisting the translation of the CORE subset of SNOMED CT into French." Studies in health technology and informatics 2011 169:819-23
34. Gerbier S, Yarovaya O, Gicquel Q, Millet AL, Smaldore V, Pagliaroli V, Darmoni SJ, Metzger MH "Evaluation of natural language processing from emergency department computerized medical records for intra-hospital syndromic surveillance." BMC Med. Inf. & Decision Making 2011 11:50
2010
35. Merabti T, Massari P, Joubert M, Sadou E, Lecroq T, Abdoune H, Rodrigues JM, Darmoni SJ "An automated approach to map a French terminology to UMLS." Studies in health technology and informatics 2010 160:1040-4
2009
36. Humphrey SM, Névéol A, Gobeil J, Ruch P, Darmoni SJ, Browne A "Comparing a Rule Based vs. Statistical System for Automatic Categorization of MEDLINE Documents According to Biomedical Specialty." Journal of the American Society for Information Science and Technology : JASIST 2009 60:2530-2539
37. Pereira S, Sakji S, Névéol A, Kergourlay I, Kerdelhué G, Serrot E, Joubert M, Darmoni SJ "Multi-terminology indexing for the assignment of MeSH descriptors to medical abstracts in French." AMIA ... Annual Symposium proceedings. AMIA Symposium 2009 2009:521-5
38. Pereira S, Plaisantin B, Korchia M, Rozanes N, Serrot E, Joubert M, Darmoni SJ "Automatic construction of dictionaries, application to product characteristics indexing." Studies in health technology and informatics 2009 150:512-6
39. Pauchet A, El-Abed M, Merabti T, Prieur , Lecroq T, Darmoni SJ "Identification de répétitions dans les navigations au sein d'un catalogue de santé." Revue d'Intelligence Artificielle 2009 23:113-132
2008
40. Darmoni SJ, Pereira S, Névéol A, Massari P, Dahamna B, Letord C, Kerdelhué G, Piot J, Derville A, Thirion B et al. "French Infobutton: an academic and business perspective." AMIA ... Annual Symposium proceedings. AMIA Symposium 2008 920
41. Kerdelhué G, Thirion B, Dahamna B, Darmoni SJ "Cataloguing and displaying Web feeds from French language health sites: a Web 2.0 add-on to a health gateway." Studies in health technology and informatics 2008 136:33-8
2007
42. Gehanno JF, Thirion B, Darmoni SJ "Evaluation of meta-concepts for information retrieval in a quality-controlled health gateway." AMIA ... Annual Symposium proceedings. AMIA Symposium 2007 269-73
43. Névéol A, Pereira S, Kerdelhué G, Dahamna B, Joubert M, Darmoni SJ "Evaluation of a simple method for the automatic assignment of MeSH descriptors to health resources in a French online catalogue." Studies in health technology and informatics 2007 129:407-11
44. Cuggia M, Darmoni SJ, Garcelon N, Soualmia LF, Bourde A "Doc'UMVF - Two search tools to provide quality-controlled teaching resources in French to students and teachers." I. J. Medical Informatics 2007 76:357-362
2006
45. Sibert L, Darmoni SJ, Thirion B, Douyere M, Dahamna B, Weber J "A web-based teaching resource to prepare for final undergraduate examination: a French pilot study." Medical teacher 2006 28:158-64
46. Névéol A, Rogozan A, Darmoni SJ "Automatic indexing of online health resources for a French quality controlled gateway." Inf. Process. Manage. 2006 42:695-709
2005
47. Névéol A, Mork JG, Aronson AR, Darmoni SJ "Evaluation of French and English MeSH indexing systems with a parallel corpus." AMIA ... Annual Symposium proceedings. AMIA Symposium 2005 565-9
2003
48. Thirion B, Loosli G, Douyère M, Darmoni SJ "Metadata element set in a quality-controlled subject gateway: a step to a health semantic Web." Studies in health technology and informatics 2003 95:707-12
49. Mayer MA, Darmoni SJ, Fiene M, Köhler C, Roth-Berghofer TR, Eysenbach G "MedCIRCLE: collaboration for Internet rating, certification, labelling and evaluation of health information on the World-Wide-Web." Studies in health technology and informatics 2003 95:667-72
50. Douyère M, Thirion B, Leroy J, Dahamna B, Darmoni SJ "Doc'CISMeF - un outil de recherche internet dirigé vers l'enseignement de la médecine." Document Numérique 2003 7:129-140
2002
51. Darmoni SJ, Le Duff F, Joubert M, Le Beux P, Fieschi M, Weber J, Benichou J "A preliminary study to assess a French code of ethics for health teaching resources on the Internet." Studies in health technology and informatics 2002 90:621-6
52. Mary V, Pouliquen B, Le Duff F, Darmoni SJ, Segui A, Le Beux P "Automatic conceptual indexing of French pharmaceutical theses." Studies in health technology and informatics 2002 90:388-92
53. Zweigenbaum P, Darmoni SJ, Grabar N, Douyère M, Benichou J "An assessment of the visibility of MeSH-indexed medical web catalogs through search engines." Proceedings. AMIA Symposium 2002 954-8
2001
54. Roussel F, Darmoni SJ, Thirion B "Cost effectiveness of a medical digital library." Medical informatics and the Internet in medicine 2001 26:325-30
55. Darmoni SJ, Thirion B, Leroyt JP, Douyère M, Lacoste B, Godard C, Rigolle I, Brisou M, Videau S, Goupyt E et al. "A search tool based on 'encapsulated' MeSH thesaurus to retrieve quality health resources on the internet." Medical informatics and the Internet in medicine 2001 26:165-78
56. Darmoni SJ, Thirion B, Leroy JP, Douyère M, Lacoste B, Godard C, Rigolle I, Brisou M, Videau S, Goupy E et al. "Doc'CISMEF: a search tool based on "encapsulated" MeSH thesaurus." Studies in health technology and informatics 2001 84:314-8
2000
57. Darmoni SJ, Benichou J, Thirion B, Hellot MF, Fuss J "A study comparing centralized CD-ROM and decentralized intranet access to MEDLINE." Bulletin of the Medical Library Association 2000 88:152-6
58. Darmoni SJ, Leroy JP, Baudic F, Douyère M, Piot J, Thirion B "CISMeF: a structured health resource guide." Methods of information in medicine 2000 39:30-5
59. Darmoni SJ, Thirion B "A standard metadata scheme for health resources." Journal of the American Medical Informatics Association : JAMIA 2000 7:108-9
60. Darmoni SJ, Thirion B "A Standard Metadata Scheme for Health Resources." JAMIA 2000 7:108-109
1999
61. Darmoni SJ, Leroy JP, Baudic F, Douyère M, Piot J, Thirion B "CISMeF: cataloque and index of French speaking health resources." Studies in health technology and informatics 1999 68:493-6
1997
62. Thirion B, Darmoni SJ "CliniWeb: Managing clinical information on the World-Wide-Web." Journal of the American Medical Informatics Association : JAMIA 1997 4:71
1995
63. Darmoni SJ, Fajner A, Mahé N, Leforestier A, Vondracek M, Stelian O, Baldenweck M "HOROPLAN: computer-assisted nurse scheduling using constraint-based programming." Journal of the Society for Health Systems 1995 5:41-54
1992
64. Darmoni SJ, Poynard T "Computer-aided decision support in hepatology." Scandinavian journal of gastroenterology 1992 27:889-96
65. Thirion B, Darmoni SJ, Moore N "Costs of medline and CD-ROM searching." Lancet (London, England) 1992 340:308
Publications de type "Rapport"
2010
66. Golbreich C, Julien G, Darmoni S "FMA and HMTP Portal in OWL: Reconciling Ontology with Terminology in Life Sciences via Metamodeling" 2010
67. Golbreich C, Julien G, Darmoni S "Pushing the FMA-OWL Enveloppe Further" 2010
Publication de type "Poster"
2010
68. Kerdelhué G, Lamy JB, Venot A, Duclos C, Darmoni S "An iconic language for the ’CISMeF Bonnes pratiques’ website" Poster EAHIL conference 2010
Publications de type "Chapitre d'ouvrage"
2007
69. Florea FI, Rogozan A, Barbu E, Bensrhair A, Darmoni S "MedIC at ImageCLEF 2006: Automatic Image Categorization and Annotation using Combined Visual Representations" 2007 670-677
2006
70. Neveol A, Darmoni S "Terminologie et accès à l'information en santé" 2006 141-159
Publications de type "Autre publication"
2009
71. Letord C, Sakji S, Pereira S, Dahamna B, Kergourlay I, Darmoni S "A Drug Information Portal in Europe" 2009 931
72. Metzger MH, Gicquel Q, Proux D, Perreira S, Kergourlay I, Serrot E, Segond F, Darmoni S "Development of an Automated Detection Tool for Health Care-Associated Infections Based on Screening Natural Language Medical Reports" 2009 967
2008
73. Pereira S, Massari P, Buemi A, Dahamna B, Serrot E, Joubert M, Darmoni S "Evaluation of two French SNOMED indexing systems with a parallel corpus" 2008 115
74. Pereira S, Massari P, Joubert M, Serrot E, Darmoni S "Exploring Multi-terminology Indexing of Discharge Summaries" 2008
75. Merabti T, Pereira S, Lecroq T, Joubert M, Darmoni S "Inheritance of SNOMED CT Relations between Concepts by two Health Terminologies (SNOMED International and ICD-10)" 2008 118
76. Darmoni S, Pereira S, Neveol A, Massari P, Dahamna B, Letord C, Kerdelhué G, Piot J, Derville A, Thirion B et al. "French Infobutton: an academic and... business perspective" 2008 920
2007
77. Caulin C, Autret-Leca E, Baumelou A, Trémolières F, German C, Darmoni S, Thirion B, Forget JF "The therapeutic guidelines database, an original new tool" 2007 5
Publications de type "Communication dans un congrès"
2019
78. Dufour JC, Grosjean J, Darmoni S, Yasini M, Marchand G, Simon C, Sarradon-Eck A, Préau M, Darmon D, Schuers M et al. "ApiAppS: A Project to Study and Help Practitioners in Recommending mHealth Apps and Devices to Their Patients." 2019 264:1919-1920 MEDINFO 2019: Health and Wellbeing e-Networks for All lyon France
79. Benis A, Crisan-Vida M, Stoicu-Tivadar L, Darmoni S "A Multi-Lingual Dictionary for Health Informatics as an International Cooperation Pillar." 2019 262:31-34 17th International Conference on Informatics, Management and Technology in Healthcare Athens Greece
2017
80. Cabot C, Soualmia L, Darmoni S "CIM-IND : Un système multilingue pour l’extraction d’information dans les textes cliniques" 2017 4ème édition du Symposium sur l'Ingénierie de l'Information Médicale, SIIM 2017 Toulouse France
81. Cabot C, Soualmia LF, Darmoni SJ "SIBM at CLEF eHealth Evaluation Lab 2017 - Multilingual Information Extraction with CIM-IND." CLEF 2017
2015
82. Chebil W, Soualmia LF, Omri MN, Darmoni SJ "Biomedical Concepts Extraction Based on Possibilistic Network and Vector Space Model." AIME 2015 227-231
83. Gicquel Q, Tvardik N, Bouvry C, Kergourlay I, Bittar A, Segond F, Darmoni SJ, Metzger MH "Annotation methods to develop and evaluate an expert system based on natural language processing in electronic medical records." MedInfo 2015 1067
84. Franco-Contreras J, Coatrieux G, Massari P, Darmoni SJ, Cuppens-Boulahia N, Cuppens F, Roux C "Data Quality Evaluation in Medical Database Watermarking." MIE 2015 276-280
2014
85. Grosjean J, Soualmia LF, Bouarech K, Jonquet C, Darmoni SJ "Comparing BioPortal and HeTOP - towards a unique biomedical ontology portal ?" IWBBIO 2014 227-237
86. Grosjean J, Soualmia LF, Bouarech K, Jonquet C, Darmoni SJ "An Approach to Compare Bio-Ontologies Portals." MIE 2014 1008-1012
2013
87. Chebil W, Soualmia LF, Darmoni SJ "BioDI - A New Approach to Improve Biomedical Documents Indexing." DEXA 2013 78-87
88. Merabti T, Soualmia LF, Grosjean J, Letord C, Darmoni SJ "Assisting the Translation of SNOMED CT into French." MedInfo 2013 47-51
2011
89. Abdoune H, Merabti T, Darmoni SJ, Joubert M "Assisting the Translation of the CORE Subset of SNOMED CT Into French." MIE 2011 819-823
2010
90. Merabti T, Massari P, Joubert M, Sadou E, Lecroq T, Abdoune H, Rodrigues JM, Darmoni SJ "An Automated Approach to map a French terminology to UMLS." MedInfo 2010 1040-1044
2009
91. Joubert M, Abdoune H, Merabti T, Darmoni SJ, Fieschi M "Assisting the Translation of SNOMED CT into French using UMLS and four Representative French-language Terminologies." AMIA 2009
92. Pereira S, Plaisantin B, Korchia M, Rozanes N, Serrot E, Joubert M, Darmoni SJ "Automatic Construction of Dictionaries, Application to Product Characteristics Indexing." MIE 2009 512-516
2008
93. Kerdelhué G, Thirion B, Dahamna B, Darmoni SJ "Cataloguing and displaying Web feeds from French language health sites - a Web 2.0 add-on to a health gateway." MIE 2008 33-38
2006
94. Joubert M, Peretti AL, Darmoni SJ, Dahamna B, Fieschi M "Contribution to an Automated Indexing of French-language Health Web Sites." AMIA 2006
95. Pereira S, Névéol A, Massari P, Joubert M, Darmoni SJ "Construction of a semi-automated ICD-10 coding help system to optimize medical and economic coding." MIE 2006 845-850
2005
96. Névéol A, Mary V, Gaudinat A, Boyer C, Rogozan A, Darmoni SJ "A Benchmark Evaluation of the French MeSH Indexers." AIME 2005 251-255
2004
97. Soualmia LF, Darmoni SJ "Combining Knowledge-Based Methods to Refine and Expand Queries in Medicine." FQAS 2004 243-255
2002
98. Duff FL, Darmoni SJ, Dufour JC, Joubert M, Fieschi M, Benichou J, Beux PL "Assessment of a French Code of Ethics for Health Teaching Resources on the Internet." AMIA 2002
99. Eysenbach G, 0007 CK, Roth-Berghofer T, Mayer MA, Fiene M, Darmoni SJ "MedCIRCLE - Collaboration for Internet Rating, Certification, Labeling and Evaluation of Health Information on the Semantic World Wide Web." AMIA 2002
100. Grabar N, Zweigenbaum P, Soualmia LF, Darmoni SJ "A Study of the Adequacy of User and Indexing Vocabularies in Natural Language Queries to a MeSH-indexed Health Gateway." AMIA 2002
2000
101. Darmoni SJ, Thirion B, Leroy JP, Douyère M, Baudic F, Piot J "CISMeF - a structured Health resource guide for healthcare professionals and patients." RIAO 2000 819-829
1999
102. Darmoni SJ, Leroy JP, Baudic F, Douyère M, Piot J, Thirion B "CISMeF - Cataloque and Index of French speaking health resources." MIE 1999 493-496
Publication de type "Article indexé dans PubMed ou WOS en Santé Publique et autres disciplines scientifiques"
2019
103. Cabot C, Darmoni S, Soualmia L "Cimind: A phonetic-based tool for multilingual named entity recognition in biomedical texts" Journal of Biomedical Informatics 2019 103176
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